Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938765.1_cds_XP_016483556.1_74656
CDS Infomation

[gene=LOC107804220] [db_xref=GeneID:107804220] [protein=armadillo repeat-containing protein LFR-like] [protein_id=XP_016483556.1] [location=join(8556..8748,11340..11509,11620..11762,11890..12146,12952..13057,13136..13274,13352..13479,13562..13817)] [gbkey=CDS]
Sequence

ATGCAGAAAAGAGAGCAATCGAAGCTAAGCGGATCAACGGGTGGCTCCGCCGCACCGCCG
GCGAAAAGGGGTCGGCCGTTTGGAAGCGGAGGCAGCAACGCTGCCGCTGCAGCCGCGGCG
GCTGCAGCAGCTGACTCAGCAGCTCCTTCAACACTCCTCGGCCCTTCCCTGCAAGTCCAC
TCTGCTTTCGCTGAACAGAATAATAAAAGGATTGTTCTGGCACTTCAAAGTGGATTAAAG
GGTGAGCTGACATGGGCACTAAATACCCTCACTTTGCTATCATTCAAGGAGAAAGATGAC
ATCCGCAAGGATGCGACTCCTCTTGCCAAAATTCCTGGATTGCTTGATGCTTTGCTTCAA
GTTATAGATGATTGGCGTGATATAGCCTTACCAAGGGTACTTGTAAAGGCACCTCGTGTG
CGGCTTTTGGGTGCAAATTCAGCTGTTACTGGATTTGGAATTGGATATGAAGCATTGAAC
TTGAATGAATCTGTACCTAATCCTAGCACTGGTTCTGGAGCTGCCAACAGAGATTCATCT
GTTCCGAAGAGTAATACCAAGTCTCGCCCTGTGGGTTGGTGGTTTGAGGAAGATGGCCTA
TTTAATTTGGATGAGGAGGGGCGAGCTGAAAAGCAGCAGTGCGCTGTTGCTGCTTCAAAC
ATTCTCCGCAACTTCTCTTTTATGCCCGATAATGAAGTCATAATGGGCCAGCATAGACAT
TGCTTAGAAACTCTATTCCAATGTCTGGCAGATTATGTTACAGAGGATGAAGAACTTGTC
ACAAATGCCCTCGAGACAATAGTGAATATAGGTCCTTTGATAGATCTCCGGATCTTCAGT
TCCTCGAAACCTTCTTTTATCAAAATAACGGAGAAACGTGCAGTCCAGGCTCTCATGGGA
GTGTTGGGATCTGCTGTCAAGGCCTGGCATTGTGCTGCAGCTGAATTAATTGGTCGTGTT
ATAATAAATCCTGATAATGAACCTTTCCTACTTCCTTTTGCTTCGCAGATATATAAACGT
TTAGTTGATATCATGAGCCAACCTGCTACTGATGCTCAAGCAGCTGCTGTTGGTGCATTA
TATAACCTTGCCGAAATAAATATGGACTGCCGTTTGAAGCTGGCTAGTGAACGATGGGCT
ATCGATAGACTGTTGAAAGTTATTAAGATGCCACATCCGGTGCCAGAAGTGTGCAGGAAA
GCGGCAACTATTTTAGAAAACCTTGTATCAGAGCCACAGAACAAGCCTCTTCTACTAGTG
TATGAAAATGCATTTGCAGAGATGCTTTTTGGTGACCCAAGATACTCGGACATATTTTCC
AGAATACTATACGAACTAACATCACGACCAAGCAACAAAGCGGCATCAGCCCGAGGGATC
TGGGGCATGTAA

Peptide Sequence

PEP ID

XP_016483556.1
PEP Infomation

PREDICTED: armadillo repeat-containing protein LFR-like [Nicotiana tabacum]
Sequence

MQKREQSKLSGSTGGSAAPPAKRGRPFGSGGSNAAAAAAAAAAADSAAPSTLLGPSLQVH
SAFAEQNNKRIVLALQSGLKGELTWALNTLTLLSFKEKDDIRKDATPLAKIPGLLDALLQ
VIDDWRDIALPRVLVKAPRVRLLGANSAVTGFGIGYEALNLNESVPNPSTGSGAANRDSS
VPKSNTKSRPVGWWFEEDGLFNLDEEGRAEKQQCAVAASNILRNFSFMPDNEVIMGQHRH
CLETLFQCLADYVTEDEELVTNALETIVNIGPLIDLRIFSSSKPSFIKITEKRAVQALMG
VLGSAVKAWHCAAAELIGRVIINPDNEPFLLPFASQIYKRLVDIMSQPATDAQAAAVGAL
YNLAEINMDCRLKLASERWAIDRLLKVIKMPHPVPEVCRKAATILENLVSEPQNKPLLLV
YENAFAEMLFGDPRYSDIFSRILYELTSRPSNKAASARGIWGM

Transcript Sequence

Gene sequence data has not been registered.